Liver fat biomarkers study from the 'Identification of gut-derived factors responsible for exercise-induced reward, physical inactivity and obesity' project

Description

The study aimed at finding gut microbiota signatures and metabolite markers in plasma and feces related to high liver fat content in humans. Based on imaging, we divided study participants into low (<5%, LF, n=25) and high (>5%, HF, n=39) liver fat groups. Fecal (LF n=14, HF n=25) and plasma (LF n=11, HF n=7) metabolomes of subsets of participants were studied using liquid chromatography/high resolution mass spectrometry. The gut microbiota were analyzed using 16S rRNA gene sequencing. Additionally, blood clinical variables, body composition and diet were studied. The list of metadata variables can be found below. They are categorized by the type of sample and/or analysis. BLOOD CLINICAL VARIABLES & UNITS alanine aminotransferase, ALT (U/L) aspartate aminotransferase, AST (U/L) gamma-glutamyltransferase, GGT(U/L) total cholesterol (mmol/L) high-density lipoprotein, HDL (mmol/L) low-density lipoprotein, LDL (mmol/L) triglycrides (mmol/L) glucose (mmol/L) insulin (iU/L) HOMA-IR BODY COMPOSITION VARIABLES & UNITS Height (cm) Weight (kg) body mass index, BMI (kg/m2) Waist circumference (cm) blood pressure (BP) systolic (mm Hg) blood pressure (BP) diastolic (mm Hg) Liver fat % GUT MICROBIOTA COMPOSITION fastq files of the sequences OUT counts per each sample relative abundance per each sample diversity measures (Shannon, Chao1, phylogenetic diversity, Bray Curtis distance) METABOLITES plasma metabolites & identification information fecal metabolites & identification information DIETARY INTAKES & UNITS (from 3 different days & average from 3 days) Energy (kJ) Energy (kcal) Protein (g) Carbohydrates (g) Fat (g) Alcohol Coffee (dl/3 days) * Fatty acids (g) Monosaturated Fatty acids (g) Polyunsaturated Fatty acids (g) Sucrose (g) Fiber, total (g) Vitamin C (mg) Thiamine (B1) (mg) Vitamin E (mg) Vitamin A (µg) Vitamin D (µg) Riboflavin (B2) (mg) Vitamin K (mg) Vitamin B6 (mg) Folate (B9) (µg) Sodium (mg) Magnesium (mg) Calcium (mg) Potassium (mg) Iron (mg) Iodine (µg) Phosphorus (mg) Selenium (µg) Zinc (mg) Fatty acids, total (g) Cholesterol (mg) Fatty acids, trans (g) Lactose (g) Fiber, total amount (g) Vitamin B12 (cobalamine) (µg) Salt (mg) Omega-6 Fatty acids (g) Omega-3 Fatty acids (g).
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Year of publication

2023

Type of data

Authors

Hospital District of Helsinki and Uusimaa - Contributor

University of Jyväskylä - Publisher, Contributor

Terveystieteiden laitos

Pekkala, Satu - Rights holder, Creator

Psykologian laitos

Lensu, Sanna Orcid -palvelun logo - Creator

Liikuntatieteellinen tiedekunta

Hintikka, Jukka - Creator

Mäkinen, Elina - Creator

Unknown

Pietiläinen, Kirsi H. - Contributor, Creator

Hakkarainen, Antti - Creator

Juvonen, Risto - Creator

Keski-Rahkonen, Pekka - Creator

Kuula, Juho - Creator

Laukkanen, Jari A. - Creator

Lehtonen, Marko - Creator

O’Connell, Thomas - Creator

Project

Other information

Fields of science

Forensic science and other medical sciences

Language

English

Open access

Restricted access

License

Other (Not Open)

Keywords

Subject headings

fatty liver, insulin resistance, metabolism, microbiology

Temporal coverage

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